Publications

Implication of the SMN complex in the biogenesis and steady state level of the Signal Recognition Particle

Piazzon, N.; Schlotter, F.; Lefebvre, S.; Dodre, M.; Mereau, A.; Soret, J.; Besse, A.; Barkats, M.; Bordonne, R.; Branlant, C.; Massenet, S.

Nucleic Acids Res 2013 / vol 41 / pages 1255-72

Intrathymic progenitor cell transplantation across histocompatibility barriers results in the persistence of early thymic progenitors and T-cell differentiation

de Barros, S. C.; Vicente, R.; Chebli, K.; Jacquet, C.; Zimmermann, V. S.; Taylor, N.

Blood 2013 / vol 121 / pages 2144-53

Hematopoietic stem cell transplantation: Targeting the thymus

de Barros, S. C.; Zimmermann, V. S.; Taylor, N.

Stem cells 2013

Impact of E1 and Cre on Adenovirus Vector Amplification: Developing MDCK CAV-2-E1 and E1-Cre Transcomplementing Cell Lines

Fernandes, P.; Santiago, V. M.; Rodrigues, A. F.; Tomas, H.; Kremer, E. J.; Alves, P. M.; Coroadinha, A. S.

PLoS One 2013 / vol 8 / pages e60342

Lymphotoxin signaling is initiated by the viral polymerase in HCV-linked tumorigenesis

Simonin, Y.; Vegna, S.; Akkari, L.; Gregoire, D.; Antoine, E.; Piette, J.; Floc'h, N.; Lassus, P.; Yu, G. Y.; Rosenberg, A. R.; Karin, M.; Durantel, D.; Hibner, U.

PLoS Pathog 2013 / vol 9 / pages e1003234

Optimization of tumor xenograft dissociation for the profiling of cell surface markers and nutrient transporters

Petit§, V.; Massonnet§, G.; Maciorowski, Z.; Touhami, J.; Thuleau, A.; Nemati, F.; Laval, J.; Chateau-Joubert, S.; Servely, J. L.; Vallerand, D.; Fontaine, J. J.; Taylor, N.; Battini, J. L.; Sitbon*, M.; Decaudin*, D.

Laboratory investigation; a journal of technical methods and pathology 2013 / pages 1-11

A comprehensive overview of the spatial and temporal variability of apple bud dormancy release and blooming phenology in Western Europe

Legave, J. M.; Blanke, M.; Christen, D.; Giovannini, D.; Mathieu, V.; Oger, R.

Int J Biometeorol 2013 / vol 57 / pages 317-31

[Vaccine-like effects of antiviral monoclonal antibodies: a novel therapeutic perspective?]

Pelegrin, M.; Gros, L.; Piechaczyk, M.

Med Sci (Paris) 2013 / vol 29 / pages 457-60

FISH-quant: automatic counting of transcripts in 3D FISH images

Mueller, F.; Senecal, A.; Tantale, K.; Marie-Nelly, H.; Ly, N.; Collin, O.; Basyuk, E.; Bertrand*, E.; Darzacq*, X.; Zimmer*, C.

Nat Methods 2013 / vol 10 / pages 277-8

MicroRNAs: new candidates for the regulation of the human cumulus-oocyte complex crosstalk

Assoua, S.; Aledani, T.; Haouzib, D.; Philippe, N.; Lecellier, C. H.; Piquemald, D.; Commes, T.; Dechauda, H.; Hamamah, S.

Human Reproduction 2013 / vol in press

The two directions of TNF-related apoptosis-inducing ligand in rheumatoid arthritis

Audo, R.; Combe, B.; Hahne, M.; Morel, J.

Cytokine 2013 / vol 63 / pages 81-90

Genome-wide identification of mRNAs associated with the protein SMN whose depletion decreases their axonal localization

Rage, F.; Boulisfane, N.; Rihan, K.; Neel, H.; Gostan, T.; Bertrand, E.; Bordonne, R.; Soret, J.

RNA 2013 / vol 19 / pages 1755-66

Disruption of the coxsackievirus and adenovirus receptor- homodimeric interaction triggers lipid microdomain- and dynamin-dependent endocytosis and lysosomal targeting

Salinas, S.; Zussy, C.; Loustalot, F.; Henaff, D.; Menendez, G.; Morton, P. E.; Parsons, M.; Schiavo, G.; Kremer, E. J.

J Biol Chem 2013

Cns Delivery of Helper-Dependent Canine Adenovirus Corrects Neuropathology and Behavior in Mucopolysaccharidosis Type Vii Mice

Ariza, L.; Gimenez-Llort, L.; Cubizolle, A.; Pages, G.; Garcia Lareu, B.; Serratrice, N.; Cots, D.; Thwaite, R.; Chillon, M.; Kremer, E.; Bosch, A.

Hum Gene Ther 2013

Chronic lymphocytic leukemia disease progression is accelerated by APRIL / TACI interaction in the TCL1 transgenic mouse model

Lascano, V.; Guadagnoli, M.; Schot, J. G.; Luijks, D. M.; Guikema, J. E.; Cameron, K.; Hahne, M.; Pals, S.; Slinger, E.; Kipps, T. J.; van Oers, M. H.; Eldering, E.; Medema, J. P.; Kater, A. P.

Blood 2013

DNA replication and spindle checkpoints cooperate during S phase to delay mitosis and preserve genome integrity

Magiera, M. M.; Gueydon, E.; Schwob, E.

J Cell Biol 2013 / vol In press

Epigenetic deregulation of genomic imprinting in humans: causal mechanisms and clinical implications

Girardot, M.; Feil, R.; Lleres, D.

Epigenomics 2013 / vol 5 / pages 715-28

Regulatory flexibility in the Nrf2-mediated stress response is conferred by conformational cycling of the Keap1-Nrf2 protein complex

Baird, L.; Lleres*, D.; Swift, S.; Dinkova-Kostova, A. T.

Proc Natl Acad Sci U S A 2013 / vol 110 / pages 15259-64

Modulation of Higher Order Chromatin Conformation in Mammalian Cell Nuclei Can Be Mediated by Polyamines and Divalent Cations

Visvanathan, A.; Ahmed, K.; Even-Faitelson, L.; Lleres, D.; Bazett-Jones, D. P.; Lamond, A. I.

PLoS One 2013 / vol 8 / pages e67689

To be or not to be a proliferation marker?

Blanchard, J. M.

Oncogene 2013

Metabolic and Environmental Conditions Determine Nuclear Genomic Instability in Budding Yeast Lacking Mitochondrial DNA

Dirick, L.; Bendris, W.; Loubiere, V.; Gostan, T.; Gueydon, E.; Schwob, E.

G3 (Bethesda) 2013

A histone acetylation switch regulates H2A.Z deposition by the SWR-C remodeling enzyme

Watanabe, S.; Radman-Livaja, M.; Rando, O. J.; Peterson, C. L.

Science 2013 / vol 340 / pages 195-9

CBC-ARS2 stimulates 3′-end maturation of multiple RNA families and favors cap-proximal processing

Hallais, M.; Pontvianne, F.; Andersen, P. R.; Clerici, M.; Lener, D.; Benbahouche Nel, H.; Gostan, T.; Vandermoere, F.; Robert, M. C.; Cusack, S.; Verheggen, C.; Jensen, T. H.; Bertrand, E.

Nat Struct Mol Biol 2013 / vol 20 / pages 1358-66

The human cap-binding complex is functionally connected to the nuclear RNA exosome

Andersen, P. R.; Domanski, M.; Kristiansen, M. S.; Storvall, H.; Ntini, E.; Verheggen, C.; Schein, A.; Bunkenborg, J.; Poser, I.; Hallais, M.; Sandberg, R.; Hyman, A.; Lacava, J.; Rout, M. P.; Andersen, J. S.; Bertrand, E.; Jensen, T. H.

Nat Struct Mol Biol 2013 / vol 20 / pages 1367-76

Corrective GUSB transfer to the canine mucopolysaccharidosis VII brain

Cubizolle, A.; Serratrice, N.; Skander, N.; Colle, M. A.; Ibanes, S.; Gennetier, A.; Bayo-Puxan, N.; Mazouni, K.; Mennechet, F.; Joussemet, B.; Cherel, Y.; Lajat, Y.; Vite, C.; Bernex, F.; Kalatzis, V.; Haskins, M. E.; Kremer, E. J.

Mol Ther 2013

Tissue-specific and SRSF1-dependent splicing of fibronectin, a matrix protein that controls host cell invasion

Lopez-Mejia, I. C.; De Toledo, M.; Della Seta, F.; Fafet, P.; Rebouissou, C.; Deleuze, V.; Blanchard, J. M.; Jorgensen, C.; Tazi, J.; Vignais, M. L.

Mol Biol Cell 2013 / vol 24 / pages 3164-76

The sirtuin SIRT6 regulates stress granule formation in C. elegans and mammals

Jedrusik-Bode, M.; Studencka, M.; Smolka, C.; Baumann, T.; Schmidt, H.; Kampf, J.; Paap, F.; Martin, S.; Tazi, J.; Muller, K. M.; Kruger, M.; Braun, T.; Bober, E.

J Cell Sci 2013 / vol 126 / pages 5166-77

Bioprocess development for canine adenovirus type 2 vectors

Fernandes, P.; Peixoto, C.; Santiago, V. M.; Kremer, E. J.; Coroadinha, A. S.; Alves, P. M.

Gene Ther 2013 / vol 20 / pages 353-60

Divergent transcription is associated with promoters of transcriptional regulators

Lepoivre, C.; Belhocine, M.; Bergon, A.; Griffon, A.; Yammine, M.; Vanhille, L.; Zacarias-Cabeza, J.; Garibal, M. A.; Koch, F.; Maqbool, M. A.; Fenouil, R.; Loriod, B.; Holota, H.; Gut, M.; Gut, I.; Imbert, J.; Andrau, J. C.; Puthier, D.; Spicuglia, S.

BMC Genomics 2013 / vol 14 / pages 914

SUMO2/3 modification of cyclin E contributes to the control of replication origin firing

Bonne-Andrea, C.; Kahli, M.; Mechali, F.; Lemaitre, J. M.; Bossis, G.; Coux, O.

Nat Commun 2013 / vol 4 / pages 1850

Ikaros’ suspended flight in the thymus

Taylor N, Zimmermann VS.

Blood 2013

Chromatin loop organization of the junb locus in mouse dendritic cells

Salem, T.; Gomard, T.; Court, F.; Moquet-Torcy, G.; Brockly, F.; Forne, T.; Piechaczyk, M.

Nucleic Acids Res 2013 / vol 41 / pages 8908-25

Heterogeneous susceptibility of circulating SIV isolate capsids to HIV-interacting factors

Mamede, J. I.; Sitbon, M.; Battini, J. L.; Courgnaud, V.

Retrovirology 2013 / vol 10 / pages 77

Metabolic adaptation of neutrophils in cystic fibrosis airways involves distinct shifts in nutrient transporter expression

Laval, J.; Touhami, J.; Herzenberg, L. A.; Conrad, C.; Taylor, N.; Battini, J. L.; Sitbon*, M.; Tirouvanziam*, R.

J Immunol 2013 / vol 190 / pages 6043-50

Locus-specific proteomics by TChP: targeted chromatin purification.

Pourfarzad F, Aghajanirefah A, de Boer E, Ten Have S, Bryn van Dijk T, Kheradmandkia S, Stadhouders R, Thongjuea S, Soler E, Gillemans N, von Lindern M, Demmers J, Philipsen S, Grosveld F.

Cell Rep. 2013

T-cell development

Swainson, L.; De Barros, S. C.; Craveiro, M.; Zimmermann, R.; Taylor, N.

Clinical Immunology/ Principles and Practices 2013 / vol In press

Metabolic pathways as regulators of HIV infection

Craveiro, M.; Clerc, I.; Sitbon*, M.; Taylor*, N.

Curr Opin HIV AIDS 2013 / vol 8 / pages 182-9

Visualization of G3BP Stress Granules Dynamics in Live Primary Cells

Martin, S.; Chebli, K.; Tazi, J.

JoVE 2013 / pages in press

Inorganic Phosphate Export by the Retrovirus Receptor XPR1 in Metazoans

Giovannini, D.; Touhami, J.; Charnet, P.; Sitbon*, M.; Battini*, J. L.

Cell Rep 2013 / vol 3 / pages 1866-73

r3Cseq: an R/Bioconductor package for the discovery of long-range genomic interactions from chromosome conformation capture and next-generation sequencing data.

Thongjuea S, Stadhouders R, Grosveld FG, Soler E, Lenhard B.

Nucleic Acids Res. 2013

Archives

Implication of the SMN complex in the biogenesis and steady state level of the Signal Recognition Particle

Intrathymic progenitor cell transplantation across histocompatibility barriers results in the persistence of early thymic progenitors and T-cell differentiation

Hematopoietic stem cell transplantation: Targeting the thymus

Impact of E1 and Cre on Adenovirus Vector Amplification: Developing MDCK CAV-2-E1 and E1-Cre Transcomplementing Cell Lines

Lymphotoxin signaling is initiated by the viral polymerase in HCV-linked tumorigenesis

Optimization of tumor xenograft dissociation for the profiling of cell surface markers and nutrient transporters

A comprehensive overview of the spatial and temporal variability of apple bud dormancy release and blooming phenology in Western Europe

[Vaccine-like effects of antiviral monoclonal antibodies: a novel therapeutic perspective?]

FISH-quant: automatic counting of transcripts in 3D FISH images

MicroRNAs: new candidates for the regulation of the human cumulus-oocyte complex crosstalk

The two directions of TNF-related apoptosis-inducing ligand in rheumatoid arthritis

Genome-wide identification of mRNAs associated with the protein SMN whose depletion decreases their axonal localization

Disruption of the coxsackievirus and adenovirus receptor- homodimeric interaction triggers lipid microdomain- and dynamin-dependent endocytosis and lysosomal targeting

Cns Delivery of Helper-Dependent Canine Adenovirus Corrects Neuropathology and Behavior in Mucopolysaccharidosis Type Vii Mice

Chronic lymphocytic leukemia disease progression is accelerated by APRIL / TACI interaction in the TCL1 transgenic mouse model

DNA replication and spindle checkpoints cooperate during S phase to delay mitosis and preserve genome integrity

Epigenetic deregulation of genomic imprinting in humans: causal mechanisms and clinical implications

Regulatory flexibility in the Nrf2-mediated stress response is conferred by conformational cycling of the Keap1-Nrf2 protein complex

Modulation of Higher Order Chromatin Conformation in Mammalian Cell Nuclei Can Be Mediated by Polyamines and Divalent Cations

To be or not to be a proliferation marker?

Metabolic and Environmental Conditions Determine Nuclear Genomic Instability in Budding Yeast Lacking Mitochondrial DNA

A histone acetylation switch regulates H2A.Z deposition by the SWR-C remodeling enzyme

CBC-ARS2 stimulates 3′-end maturation of multiple RNA families and favors cap-proximal processing

The human cap-binding complex is functionally connected to the nuclear RNA exosome

Corrective GUSB transfer to the canine mucopolysaccharidosis VII brain

Tissue-specific and SRSF1-dependent splicing of fibronectin, a matrix protein that controls host cell invasion

The sirtuin SIRT6 regulates stress granule formation in C. elegans and mammals

Bioprocess development for canine adenovirus type 2 vectors

Divergent transcription is associated with promoters of transcriptional regulators

SUMO2/3 modification of cyclin E contributes to the control of replication origin firing

Ikaros’ suspended flight in the thymus

Chromatin loop organization of the junb locus in mouse dendritic cells

Heterogeneous susceptibility of circulating SIV isolate capsids to HIV-interacting factors

Metabolic adaptation of neutrophils in cystic fibrosis airways involves distinct shifts in nutrient transporter expression

Locus-specific proteomics by TChP: targeted chromatin purification.

T-cell development

Metabolic pathways as regulators of HIV infection

Visualization of G3BP Stress Granules Dynamics in Live Primary Cells

Inorganic Phosphate Export by the Retrovirus Receptor XPR1 in Metazoans

r3Cseq: an R/Bioconductor package for the discovery of long-range genomic interactions from chromosome conformation capture and next-generation sequencing data.